dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000004006_5|CGC1
Gene ID: MGYG000004006_01399
Location and strand information: 79640 - 81394 (+)
Family: 3.A.2.3.3
Protein type: TC
Protein description: V-type sodium ATPase catalytic subunit A

Gene clsuter ID: MGYG000004006_5|CGC1
Gene ID: MGYG000004006_01400
Location and strand information: 81398 - 82720 (+)
Family: 3.A.2.3.3
Protein type: TC
Protein description: V-type sodium ATPase subunit B

Gene clsuter ID: MGYG000004006_5|CGC1
Gene ID: MGYG000004006_01401
Location and strand information: 82888 - 83496 (+)
Family: null
Protein type: null
Protein description: V-type ATP synthase subunit D

Gene clsuter ID: MGYG000004006_5|CGC1
Gene ID: MGYG000004006_01402
Location and strand information: 83493 - 85340 (+)
Family: 3.A.2.3.3
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004006_5|CGC1
Gene ID: MGYG000004006_01403
Location and strand information: 85361 - 85816 (+)
Family: null
Protein type: null
Protein description: V-type sodium ATPase subunit K

Gene clsuter ID: MGYG000004006_5|CGC1
Gene ID: MGYG000004006_01404
Location and strand information: 86579 - 89701 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000004006_5|CGC1
Gene ID: MGYG000004006_01405
Location and strand information: 89720 - 91363 (+)
Family: 8.A.46.1.3
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004006_5|CGC1
Gene ID: MGYG000004006_01406
Location and strand information: 91391 - 92545 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004006_5|CGC1
Gene ID: MGYG000004006_01407
Location and strand information: 92607 - 94745 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004006_5|CGC1
Gene ID: MGYG000004006_01408
Location and strand information: 94816 - 96039 (+)
Family: GH76
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.291
Protein molecular weight: 45374.51
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004006_5|CGC1
Gene ID: MGYG000004006_01409
Location and strand information: 96279 - 100382 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000004006_5|CGC1
Gene ID: MGYG000004006_01410
Location and strand information: 100673 - 101386 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004006_5|CGC1
Gene ID: MGYG000004006_01411
Location and strand information: 101423 - 102613 (+)
Family: GH76
Protein type: CAZyme
Protein description: Cellobiose 2-epimerase
Protein isoelectric point: 4.6582
Protein molecular weight: 44485.79
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004006_5|CGC1
Gene ID: MGYG000004006_01412
Location and strand information: 102658 - 104181 (+)
Family: GH125
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.851
Protein molecular weight: 57457.2
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004006_5|CGC1
Gene ID: MGYG000004006_01413
Location and strand information: 104256 - 106196 (+)
Family: GH97
Protein type: CAZyme
Protein description: Retaining alpha-galactosidase
Protein isoelectric point: 4.7226
Protein molecular weight: 73734.5
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004006_5|CGC1
Gene ID: MGYG000004006_01414
Location and strand information: 106461 - 108800 (+)
Family: GH92
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.7231
Protein molecular weight: 88424.11
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004006_5|CGC1
Gene ID: MGYG000004006_01415
Location and strand information: 108814 - 111159 (+)
Family: GH92
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.1642
Protein molecular weight: 89250.7
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000004006_01408	GH76_e32
MGYG000004006_01411	GH76_e1\|3.2.1.101	alpha-mannan
MGYG000004006_01412	GH125_e1\|3.2.1.-	alpha-mannan
MGYG000004006_01413	GH97_e20\|3.2.1.22	alpha-glucan
MGYG000004006_01414	GH92_e34\|3.2.1.24\|3.2.1.-	hostglycan
MGYG000004006_01415	GH92_e34\|3.2.1.24\|3.2.1.-	hostglycan

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is alpha-mannan|host glycan

Substrate predicted by dbCAN-PUL is mucin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000004006_01399	V-type sodium ATPase catalytic subunit A	TC	79640	81394	+	3.A.2.3.3
MGYG000004006_01400	V-type sodium ATPase subunit B	TC	81398	82720	+	3.A.2.3.3
MGYG000004006_01401	V-type ATP synthase subunit D	null	82888	83496	+	ATP-synt_D
MGYG000004006_01402	hypothetical protein	TC	83493	85340	+	3.A.2.3.3
MGYG000004006_01403	V-type sodium ATPase subunit K	null	85361	85816	+	ATP-synt_C\| ATP-synt_C
MGYG000004006_01404	TonB-dependent receptor SusC	TC	86579	89701	+	1.B.14.6.1
MGYG000004006_01405	hypothetical protein	TC	89720	91363	+	8.A.46.1.3
MGYG000004006_01406	hypothetical protein	null	91391	92545	+	SusE
MGYG000004006_01407	hypothetical protein	null	92607	94745	+	SusE\| SusE
MGYG000004006_01408	hypothetical protein	CAZyme	94816	96039	+	GH76
MGYG000004006_01409	Sensor histidine kinase RcsC	TF	96279	100382	-	HTH_AraC+HTH_AraC
MGYG000004006_01410	hypothetical protein	null	100673	101386	+	Lipase_GDSL_2
MGYG000004006_01411	Cellobiose 2-epimerase	CAZyme	101423	102613	+	GH76
MGYG000004006_01412	hypothetical protein	CAZyme	102658	104181	+	GH125
MGYG000004006_01413	Retaining alpha-galactosidase	CAZyme	104256	106196	+	GH97
MGYG000004006_01414	hypothetical protein	CAZyme	106461	108800	+	GH92
MGYG000004006_01415	hypothetical protein	CAZyme	108814	111159	+	GH92
Protein ID	Protein Name	Type	Start	End	Strand	Signature